use "C:\Users\Raúl Castro C\Desktop\Base de datos\Base de Raúl_MCB2020.dta"
tab sexo Casos_Controles , col chi
tab Casos_Controles
tabstat edad , statistics( p50 p5 p95 ) by( Casos_Controles Casos_Controles ) columns(variables)
tabstat edad , statistics( p50 p5 p95 ) by( Casos_Controles ) columns(variables)
tabstat edad , statistics( p50 p5 p95 ) by( dx ) columns(variables)
tab nivel_de_estudios Casos_Controles , col chi
tab Casos_Controles
tab indiceriesgo
tab indiceriesgo Casos_Controles
tabstat PTIpromed , statistics( p50 p5 p95 ) by( Casos_Contro
> les ) columns(variables)
tabstat BOP , statistics( p50 p5 p95 ) by( Casos_Contro
> les ) columns(variables)
tabstat BOP , statistics( p50 p5 p95 ) by( Casos_Contro
> les ) columns(variables)
tabstat Casos_Controles , statistics( p50 p5 p95 ) by( BOP ) columns(variables)
tabstat BOP , statistics( p50 p5 p95 ) by( Casos_Contro
> les ) columns(variables)
tab NPgingivalis Casos_Controles , col chi
tab n PPnigrescens Casos_Controles , col chi
tab PPnigrescens Casos_Controles , col chi
swilk BOP
codebook Casos_Controles NPgingivalis
tabulate NPgingivalis Casos_Controles
cc Casos_Controles NPgingivalis
cc Casos_Controles NAgeorgiae
cc Casos_Controles NAnaeslundii
cc Casos_Controles NAab
cc Casos_Controles NCrectus
cc Casos_Controles NCgingivalis
cc Casos_Controles NCsputigena
cc Casos_Controles NEnodatum
cc Casos_Controles NFnucnuc
cc Casos_Controles NFperiodonticum
cc Casos_Controles NPintermedia
cc Casos_Controles NPnigrescens
cc Casos_Controles NPacnes
cc Casos_Controles NSanginosus
cc Casos_Controles NSgordonii
cc Casos y Controles NTforsythia
cc Casos_Controles NTforsythia
cc Casos_Controles NTdenticola
cc Casos_Controles NVparvula
cc Casos_Controles Nivtotales
cc Casos_Controles PAgeorgiae
cc Casos_Controles PAnaeslundii
cc Casos_Controles PAab
cc Casos_Controles PCrectus
cc Casos_Controles PCgingivalis
cc Casos_Controles PCsputigena
cc Casos_Controles PEnodatum
cc Casos_Controles PFnucnuc
cc Casos_Controles PFperiodonticum
cc Casos_Controles PPgingivalis
cc Casos_Controles PPintermedia
cc Casos_Controles PPnigrescens
cc Casos_Controles PPacnes
cc Casos_Controles PSanginosus
cc Casos_Controles PSgordonii
cc Casos_Controles PTforsythia
cc Casos_Controles PTdenticola
cc Casos_Controles PVparvula
cc Casos_Controles NPintermedia
cc Casos_Controles EnodatumP
cc Casos_Controles FnucnucP
cc Casos Controles NFnucnuc
cc Casos_Controles NFnucnuc
tabulate PAgeorgiae Casos_Controles
cc Casos_Controles NPgingivalis
cc Casos_Controles PPgingivalis
cc Casos_Controles PgingivalisP
tabulate PgingivalisP Casos_Controles
tabulate PAab Casos_Controles
generate var131 = 47 in 1
swilk NPgingivalis NAgeorgiae
swilk NPgingivalis NAgeorgiae NAnaeslundii NAab NCrectus NCgingivalis NCsputigena NEnodatum NFnucnuc NFperiodonticum NPintermedia NPnigrescens NPacnes NSanginosus NSgordonii NTforsythia NTdenticola NVparvula Nivtotales
rename var131 Pol2570
rename Pol2570 SNP2570
generate str var132 = "a" in 1
generate str var133 = "a" in 1
rename var132 SNP896
rename var133 SNP
rename SNP SNP1196
save "C:\Users\Raúl Castro C\Desktop\Base de datos\Base de Raúl_MCB2020.dta", replace
tab NPgingivalis NAgeorgiae NAnaeslundii NAab NCrectus NCgingivalis NCsputigena NEnodatum NFnucnuc NFperiodonticum NPintermedia NPnigrescens NPacnes NSanginosus NSgordonii NTforsythia NTdenticola NVparvula Nivtotales
tabulate NPgingivalis NAgeorgiae NAnaeslundii NAab NCrectus NCgingivalis NCsputigena NEnodatum NFnucnuc NFperiodonticum NPintermedia NPnigrescens NPacnes NSanginosus NSgordonii NTforsythia NTdenticola NVparvula Nivtotales
tabulate NPgingivalis NAgeorgiae NAnaeslundii NAab NCrectus NCgingivalis NCsputigena NEnodatum NFnucnuc NFperiodonticum NPintermedia NPnigrescens NPacnes NSanginosus NSgordonii NTforsythia NTdenticola NVparvula
tab NPgingivalis NAgeorgiae NAnaeslundii NAab NCrectus NCgingivalis NCsputigena NEnodatum NFnucnuc NFperiodonticum NPintermedia NPnigrescens NPacnes NSanginosus NSgordonii NTforsythia NTdenticola NVparvula
tab NPnigrescens
xtile Casos_Controles BOP
tabstat edad , statistics( p50 p5 p95 ) by( Casos_Controles BOP ) columns(variables)
tabstat edad , statistics( p50 p5 p95 ) by( BOP Casos_Controles ) columns(variables)
tab BOP
tabstat BOP, statistics( median p25 p75 ) by(Casos_Controles)
ranksum BOP, by(Casos_Controles)
tabstat movilidadprom , statistics( median p25 p75 ) by(Casos_Controles)
tabstat profbolsprom , statistics( median p25 p75 ) by(Casos_Controles)
ranksum profbolsprom , by(Casos_Controles)
tabstat PTIpromed , statistics( median p25 p75 ) by(Casos_Controles)
ranksum PTIpromed , by(Casos_Controles)
___ ____ ____ ____ ____ (R)
/__ / ____/ / ____/
___/ / /___/ / /___/ 15.1 Copyright 1985-2017 StataCorp LLC
Statistics/Data Analysis StataCorp
4905 Lakeway Drive
College Station, Texas 77845 USA
800-STATA-PC http://www.stata.com
979-696-4600 stata@stata.com
979-696-4601 (fax)
Single-user Stata perpetual license:
Serial number: 301506215585
Licensed to: StataForAll
www.stata.com
Notes:
1. Unicode is supported; see help unicode_advice.
. use "C:\Users\Raúl Castro C\Desktop\Base de datos\Base d
> e Raúl_MCB2020.dta"
. tab sexo Casos_Controles , col chi
+-------------------+
| Key |
|-------------------|
| frequency |
| column percentage |
+-------------------+
sexo segun | Casos_Controles
apariencia | Control Casos | Total
-----------+----------------------+----------
masculino | 17 26 | 43
| 32.08 44.83 | 38.74
-----------+----------------------+----------
femenino | 36 32 | 68
| 67.92 55.17 | 61.26
-----------+----------------------+----------
Total | 53 58 | 111
| 100.00 100.00 | 100.00
Pearson chi2(1) = 1.8976 Pr = 0.168
. tab Casos_Controles
Casos_Contr |
oles | Freq. Percent Cum.
------------+-----------------------------------
Control | 53 47.75 47.75
Casos | 58 52.25 100.00
------------+-----------------------------------
Total | 111 100.00
. tabstat edad , statistics( p50 p5 p95 ) by( Casos_Contro
> les Casos_Controles ) columns(variables)
by(): too many variables specified
r(103);
. tabstat edad , statistics( p50 p5 p95 ) by( Casos_Contro
> les ) columns(variables)
Summary statistics: p50, p5, p95
by categories of: Casos_Controles
Casos_Controles | edad
----------------+----------
Control | 21
| 17
| 57
----------------+----------
Casos | 44.5
| 20
| 71
----------------+----------
Total | 26
| 18
| 64
---------------------------
. tabstat edad , statistics( p50 p5 p95 ) by( dx ) columns
> (variables)
Summary statistics: p50, p5, p95
by categories of: dx (diagnostico)
dx | edad
-----------------+----------
sano | 21
| 16
| 47
-----------------+----------
gingivitis | 24
| 18
| 60
-----------------+----------
periodontitis le | 35
| 20
| 55
-----------------+----------
periodontitis mo | 45.5
| 18
| 73
-----------------+----------
periodontitis se | 51
| 30
| 73
-----------------+----------
Total | 26
| 18
| 64
----------------------------
. tab nivel_de_estudios Casos_Controles , col chi
+-------------------+
| Key |
|-------------------|
| frequency |
| column percentage |
+-------------------+
�hasta que a�o |
estudi� o estudia | Casos_Controles
actualmente? | Control Casos | Total
------------------+----------------------+----------
universidad o m�s | 35 21 | 56
| 66.04 36.21 | 50.45
------------------+----------------------+----------
preparatoria | 10 11 | 21
| 18.87 18.97 | 18.92
------------------+----------------------+----------
secundaria | 5 7 | 12
| 9.43 12.07 | 10.81
------------------+----------------------+----------
primaria | 3 15 | 18
| 5.66 25.86 | 16.22
------------------+----------------------+----------
no estudi� | 0 4 | 4
| 0.00 6.90 | 3.60
------------------+----------------------+----------
Total | 53 58 | 111
| 100.00 100.00 | 100.00
Pearson chi2(4) = 15.6876 Pr = 0.003
. tab Casos_Controles
Casos_Contr |
oles | Freq. Percent Cum.
------------+-----------------------------------
Control | 53 47.75 47.75
Casos | 58 52.25 100.00
------------+-----------------------------------
Total | 111 100.00
. tab indiceriesgo
indice de |
riesgo | Freq. Percent Cum.
------------+-----------------------------------
bajo | 48 46.15 46.15
medio | 50 48.08 94.23
alto | 6 5.77 100.00
------------+-----------------------------------
Total | 104 100.00
. tab indiceriesgo Casos_Controles
indice de | Casos_Controles
riesgo | Control Casos | Total
-----------+----------------------+----------
bajo | 29 19 | 48
medio | 20 30 | 50
alto | 0 6 | 6
-----------+----------------------+----------
Total | 49 55 | 104
. tabstat PTIpromed , statistics( p50 p5 p95 ) by( Casos_C
> ontro
) required
r(100);
.
. > les ) columns(variables)
> is not a valid command name
r(199);
.
.
. tabstat BOP , statistics( p50 p5 p95 ) by( Casos_Contro
) required
r(100);
.
. > les ) columns(variables)
> is not a valid command name
r(199);
.
.
. tabstat BOP , statistics( p50 p5 p95 ) by( Casos_Contro
) required
r(100);
.
. > les ) columns(variables)
> is not a valid command name
r(199);
.
.
. tabstat Casos_Controles , statistics( p50 p5 p95 ) by( B
> OP ) columns(variables)
Summary statistics: p50, p5, p95
by categories of: BOP
BOP | Casos_~s
---------+----------
0 | 0
| 0
| 1
---------+----------
4 | 1
| 0
| 1
---------+----------
7 | 1
| 0
| 1
---------+----------
8 | 1
| 1
| 1
---------+----------
9 | 1
| 1
| 1
---------+----------
11 | 0
| 0
| 1
---------+----------
14 | 1
| 0
| 1
---------+----------
15 | 1
| 0
| 1
---------+----------
16 | 1
| 1
| 1
---------+----------
17 | 1
| 1
| 1
---------+----------
18 | .5
| 0
| 1
---------+----------
21 | 1
| 1
| 1
---------+----------
25 | 1
| 1
| 1
---------+----------
28 | 1
| 1
| 1
---------+----------
29 | 1
| 1
| 1
---------+----------
32 | 1
| 1
| 1
---------+----------
33 | 1
| 1
| 1
---------+----------
36 | 1
| 1
| 1
---------+----------
39 | 1
| 1
| 1
---------+----------
43 | 1
| 1
| 1
---------+----------
44 | 1
| 1
| 1
---------+----------
56 | 1
| 1
| 1
---------+----------
64 | 1
| 1
| 1
---------+----------
69 | 1
| 1
| 1
---------+----------
Total | 1
| 0
| 1
--------------------
. tabstat BOP , statistics( p50 p5 p95 ) by( Casos_Contro
) required
r(100);
.
. > les ) columns(variables)
> is not a valid command name
r(199);
.
.
. tab NPgingivalis Casos_Controles , col chi
+-------------------+
| Key |
|-------------------|
| frequency |
| column percentage |
+-------------------+
NPgingival | Casos_Controles
is | Control Casos | Total
-----------+----------------------+----------
0 | 29 7 | 36
| 54.72 12.07 | 32.43
-----------+----------------------+----------
.11 | 1 0 | 1
| 1.89 0.00 | 0.90
-----------+----------------------+----------
.2 | 0 1 | 1
| 0.00 1.72 | 0.90
-----------+----------------------+----------
.22 | 0 1 | 1
| 0.00 1.72 | 0.90
-----------+----------------------+----------
.27 | 0 2 | 2
| 0.00 3.45 | 1.80
-----------+----------------------+----------
.29 | 1 0 | 1
| 1.89 0.00 | 0.90
-----------+----------------------+----------
.35 | 1 0 | 1
| 1.89 0.00 | 0.90
-----------+----------------------+----------
.49 | 0 1 | 1
| 0.00 1.72 | 0.90
-----------+----------------------+----------
.55 | 0 1 | 1
| 0.00 1.72 | 0.90
-----------+----------------------+----------
.56 | 1 0 | 1
| 1.89 0.00 | 0.90
-----------+----------------------+----------
.59 | 0 1 | 1
| 0.00 1.72 | 0.90
-----------+----------------------+----------
.73 | 1 0 | 1
| 1.89 0.00 | 0.90
-----------+----------------------+----------
.74 | 1 1 | 2
| 1.89 1.72 | 1.80
-----------+----------------------+----------
.8 | 1 0 | 1
| 1.89 0.00 | 0.90
-----------+----------------------+----------
.81 | 0 1 | 1
| 0.00 1.72 | 0.90
-----------+----------------------+----------
.83 | 0 1 | 1
| 0.00 1.72 | 0.90
-----------+----------------------+----------
.88 | 0 1 | 1
| 0.00 1.72 | 0.90
-----------+----------------------+----------
.93 | 1 0 | 1
| 1.89 0.00 | 0.90
-----------+----------------------+----------
1.07 | 1 0 | 1
| 1.89 0.00 | 0.90
-----------+----------------------+----------
1.12 | 1 0 | 1
| 1.89 0.00 | 0.90
-----------+----------------------+----------
1.23 | 1 0 | 1
| 1.89 0.00 | 0.90
-----------+----------------------+----------
1.24 | 0 1 | 1
| 0.00 1.72 | 0.90
-----------+----------------------+----------
1.25 | 0 1 | 1
| 0.00 1.72 | 0.90
-----------+----------------------+----------
1.27 | 0 1 | 1
| 0.00 1.72 | 0.90
-----------+----------------------+----------
1.55 | 1 0 | 1
| 1.89 0.00 | 0.90
-----------+----------------------+----------
1.7 | 1 0 | 1
| 1.89 0.00 | 0.90
-----------+----------------------+----------
1.87 | 0 1 | 1
| 0.00 1.72 | 0.90
-----------+----------------------+----------
2 | 1 0 | 1
| 1.89 0.00 | 0.90
-----------+----------------------+----------
2.08 | 0 1 | 1
| 0.00 1.72 | 0.90
-----------+----------------------+----------
2.09 | 1 0 | 1
| 1.89 0.00 | 0.90
-----------+----------------------+----------
2.14 | 1 0 | 1
| 1.89 0.00 | 0.90
-----------+----------------------+----------
2.66 | 0 1 | 1
| 0.00 1.72 | 0.90
-----------+----------------------+----------
2.81 | 0 1 | 1
| 0.00 1.72 | 0.90
-----------+----------------------+----------
3.03 | 0 2 | 2
| 0.00 3.45 | 1.80
-----------+----------------------+----------
3.05 | 0 1 | 1
| 0.00 1.72 | 0.90
-----------+----------------------+----------
3.25 | 1 0 | 1
| 1.89 0.00 | 0.90
-----------+----------------------+----------
4.55 | 0 1 | 1
| 0.00 1.72 | 0.90
-----------+----------------------+----------
4.58 | 0 1 | 1
| 0.00 1.72 | 0.90
-----------+----------------------+----------
5.24 | 1 0 | 1
| 1.89 0.00 | 0.90
-----------+----------------------+----------
5.57 | 0 1 | 1
| 0.00 1.72 | 0.90
-----------+----------------------+----------
5.72 | 1 0 | 1
| 1.89 0.00 | 0.90
-----------+----------------------+----------
5.91 | 0 1 | 1
| 0.00 1.72 | 0.90
-----------+----------------------+----------
6.34 | 0 1 | 1
| 0.00 1.72 | 0.90
-----------+----------------------+----------
7.89 | 0 1 | 1
| 0.00 1.72 | 0.90
-----------+----------------------+----------
8.15 | 0 1 | 1
| 0.00 1.72 | 0.90
-----------+----------------------+----------
8.21 | 1 0 | 1
| 1.89 0.00 | 0.90
-----------+----------------------+----------
8.86 | 0 1 | 1
| 0.00 1.72 | 0.90
-----------+----------------------+----------
9.04 | 0 1 | 1
| 0.00 1.72 | 0.90
-----------+----------------------+----------
9.24 | 0 1 | 1
| 0.00 1.72 | 0.90
-----------+----------------------+----------
9.26 | 0 1 | 1
| 0.00 1.72 | 0.90
-----------+----------------------+----------
9.62 | 1 0 | 1
| 1.89 0.00 | 0.90
-----------+----------------------+----------
9.92 | 0 1 | 1
| 0.00 1.72 | 0.90
-----------+----------------------+----------
10.15 | 0 1 | 1
| 0.00 1.72 | 0.90
-----------+----------------------+----------
10.28 | 0 1 | 1
| 0.00 1.72 | 0.90
-----------+----------------------+----------
10.43 | 0 1 | 1
| 0.00 1.72 | 0.90
-----------+----------------------+----------
11.02 | 0 1 | 1
| 0.00 1.72 | 0.90
-----------+----------------------+----------
11.24 | 0 1 | 1
| 0.00 1.72 | 0.90
-----------+----------------------+----------
11.97 | 0 1 | 1
| 0.00 1.72 | 0.90
-----------+----------------------+----------
12.07 | 1 0 | 1
| 1.89 0.00 | 0.90
-----------+----------------------+----------
12.28 | 0 1 | 1
| 0.00 1.72 | 0.90
-----------+----------------------+----------
12.35 | 0 1 | 1
| 0.00 1.72 | 0.90
-----------+----------------------+----------
12.98 | 0 1 | 1
| 0.00 1.72 | 0.90
-----------+----------------------+----------
13.5 | 0 1 | 1
| 0.00 1.72 | 0.90
-----------+----------------------+----------
13.64 | 0 1 | 1
| 0.00 1.72 | 0.90
-----------+----------------------+----------
13.69 | 1 0 | 1
| 1.89 0.00 | 0.90
-----------+----------------------+----------
13.91 | 0 1 | 1
| 0.00 1.72 | 0.90
-----------+----------------------+----------
14.28 | 0 1 | 1
| 0.00 1.72 | 0.90
-----------+----------------------+----------
14.45 | 0 1 | 1
| 0.00 1.72 | 0.90
-----------+----------------------+----------
15.11 | 1 0 | 1
| 1.89 0.00 | 0.90
-----------+----------------------+----------
16.23 | 0 1 | 1
| 0.00 1.72 | 0.90
-----------+----------------------+----------
16.66 | 0 1 | 1
| 0.00 1.72 | 0.90
-----------+----------------------+----------
17.1 | 0 1 | 1
| 0.00 1.72 | 0.90
-----------+----------------------+----------
21.88 | 0 1 | 1
| 0.00 1.72 | 0.90
-----------+----------------------+----------
Total | 53 58 | 111
| 100.00 100.00 | 100.00
Pearson chi2(72) = 86.3945 Pr = 0.118
. tab n PPnigrescens Casos_Controles , col chi
n ambiguous abbreviation
r(111);
. tab PPnigrescens Casos_Controles , col chi
+-------------------+
| Key |
|-------------------|
| frequency |
| column percentage |
+-------------------+
PPnigresce | Casos_Controles
ns | Control Casos | Total
-----------+----------------------+----------
No | 18 9 | 27
| 33.96 15.52 | 24.32
-----------+----------------------+----------
si | 35 49 | 84
| 66.04 84.48 | 75.68
-----------+----------------------+----------
Total | 53 58 | 111
| 100.00 100.00 | 100.00
Pearson chi2(1) = 5.1185 Pr = 0.024
. swilk BOP
Shapiro-Wilk W test for normal data
Variable | Obs W V z
> Prob>z
-------------+--------------------------------------------
> ----------
BOP | 111 0.81517 16.654 6.275
> 0.00000
. codebook Casos_Controles NPgingivalis
----------------------------------------------------------------------------------------------------------------------------------
Casos_Controles (unlabeled)
----------------------------------------------------------------------------------------------------------------------------------
type: numeric (float)
label: Casos_Controles
range: [0,1] units: 1
unique values: 2 missing .: 0/111
tabulation: Freq. Numeric Label
53 0 Control
58 1 Casos
----------------------------------------------------------------------------------------------------------------------------------
NPgingivalis (unlabeled)
----------------------------------------------------------------------------------------------------------------------------------
type: numeric (float)
range: [0,21.88] units: .01
unique values: 73 missing .: 0/111
mean: 4.07315
std. dev: 5.40034
percentiles: 10% 25% 50% 75% 90%
0 0 1.07 8.21 12.98
. tabulate NPgingivalis Casos_Controles
NPgingival | Casos_Controles
is | Control Casos | Total
-----------+----------------------+----------
0 | 29 7 | 36
.11 | 1 0 | 1
.2 | 0 1 | 1
.22 | 0 1 | 1
.27 | 0 2 | 2
.29 | 1 0 | 1
.35 | 1 0 | 1
.49 | 0 1 | 1
.55 | 0 1 | 1
.56 | 1 0 | 1
.59 | 0 1 | 1
.73 | 1 0 | 1
.74 | 1 1 | 2
.8 | 1 0 | 1
.81 | 0 1 | 1
.83 | 0 1 | 1
.88 | 0 1 | 1
.93 | 1 0 | 1
1.07 | 1 0 | 1
1.12 | 1 0 | 1
1.23 | 1 0 | 1
1.24 | 0 1 | 1
1.25 | 0 1 | 1
1.27 | 0 1 | 1
1.55 | 1 0 | 1
1.7 | 1 0 | 1
1.87 | 0 1 | 1
2 | 1 0 | 1
2.08 | 0 1 | 1
2.09 | 1 0 | 1
2.14 | 1 0 | 1
2.66 | 0 1 | 1
2.81 | 0 1 | 1
3.03 | 0 2 | 2
3.05 | 0 1 | 1
3.25 | 1 0 | 1
4.55 | 0 1 | 1
4.58 | 0 1 | 1
5.24 | 1 0 | 1
5.57 | 0 1 | 1
5.72 | 1 0 | 1
5.91 | 0 1 | 1
6.34 | 0 1 | 1
7.89 | 0 1 | 1
8.15 | 0 1 | 1
8.21 | 1 0 | 1
8.86 | 0 1 | 1
9.04 | 0 1 | 1
9.24 | 0 1 | 1
9.26 | 0 1 | 1
9.62 | 1 0 | 1
9.92 | 0 1 | 1
10.15 | 0 1 | 1
10.28 | 0 1 | 1
10.43 | 0 1 | 1
11.02 | 0 1 | 1
11.24 | 0 1 | 1
11.97 | 0 1 | 1
12.07 | 1 0 | 1
12.28 | 0 1 | 1
12.35 | 0 1 | 1
12.98 | 0 1 | 1
13.5 | 0 1 | 1
13.64 | 0 1 | 1
13.69 | 1 0 | 1
13.91 | 0 1 | 1
14.28 | 0 1 | 1
14.45 | 0 1 | 1
15.11 | 1 0 | 1
16.23 | 0 1 | 1
16.66 | 0 1 | 1
17.1 | 0 1 | 1
21.88 | 0 1 | 1
-----------+----------------------+----------
Total | 53 58 | 111
. cc Casos_Controles NPgingivalis
Proportion
| Exposed Unexposed | Total Exposed
-----------------+------------------------+------------------------
Cases | 51 7 | 58 0.8793
Controls | 24 29 | 53 0.4528
-----------------+------------------------+------------------------
Total | 75 36 | 111 0.6757
| |
| Point estimate | [95% Conf. Interval]
|------------------------+------------------------
Odds ratio | 8.803571 | 3.138406 26.74671 (exact)
Attr. frac. ex. | .8864097 | .6813669 .9626122 (exact)
Attr. frac. pop | .7794293 |
+-------------------------------------------------
chi2(1) = 22.99 Pr>chi2 = 0.0000
. cc Casos_Controles NAgeorgiae
Proportion
| Exposed Unexposed | Total Exposed
-----------------+------------------------+------------------------
Cases | 29 29 | 58 0.5000
Controls | 32 21 | 53 0.6038
-----------------+------------------------+------------------------
Total | 61 50 | 111 0.5495
| |
| Point estimate | [95% Conf. Interval]
|------------------------+------------------------
Odds ratio | .65625 | .2880749 1.489613 (exact)
Prev. frac. ex. | .34375 | -.4896128 .7119251 (exact)
Prev. frac. pop | .2075472 |
+-------------------------------------------------
chi2(1) = 1.20 Pr>chi2 = 0.2724
. cc Casos_Controles NAnaeslundii
Proportion
| Exposed Unexposed | Total Exposed
-----------------+------------------------+------------------------
Cases | 21 37 | 58 0.3621
Controls | 22 31 | 53 0.4151
-----------------+------------------------+------------------------
Total | 43 68 | 111 0.3874
| |
| Point estimate | [95% Conf. Interval]
|------------------------+------------------------
Odds ratio | .7997543 | .3468442 1.843288 (exact)
Prev. frac. ex. | .2002457 | -.8432882 .6531558 (exact)
Prev. frac. pop | .0831209 |
+-------------------------------------------------
chi2(1) = 0.33 Pr>chi2 = 0.5668
. cc Casos_Controles NAab
Proportion
| Exposed Unexposed | Total Exposed
-----------------+------------------------+------------------------
Cases | 13 45 | 58 0.2241
Controls | 3 50 | 53 0.0566
-----------------+------------------------+------------------------
Total | 16 95 | 111 0.1441
| |
| Point estimate | [95% Conf. Interval]
|------------------------+------------------------
Odds ratio | 4.814815 | 1.1988 27.66375 (exact)
Attr. frac. ex. | .7923077 | .1658326 .9638516 (exact)
Attr. frac. pop | .1775862 |
+-------------------------------------------------
chi2(1) = 6.30 Pr>chi2 = 0.0121
. cc Casos_Controles NCrectus
Proportion
| Exposed Unexposed | Total Exposed
-----------------+------------------------+------------------------
Cases | 34 24 | 58 0.5862
Controls | 28 25 | 53 0.5283
-----------------+------------------------+------------------------
Total | 62 49 | 111 0.5586
| |
| Point estimate | [95% Conf. Interval]
|------------------------+------------------------
Odds ratio | 1.264881 | .5582039 2.868552 (exact)
Attr. frac. ex. | .2094118 | -.7914601 .6513921 (exact)
Attr. frac. pop | .1227586 |
+-------------------------------------------------
chi2(1) = 0.38 Pr>chi2 = 0.5394
. cc Casos_Controles NCgingivalis
Proportion
| Exposed Unexposed | Total Exposed
-----------------+------------------------+------------------------
Cases | 30 28 | 58 0.5172
Controls | 30 23 | 53 0.5660
-----------------+------------------------+------------------------
Total | 60 51 | 111 0.5405
| |
| Point estimate | [95% Conf. Interval]
|------------------------+------------------------
Odds ratio | .8214286 | .3630609 1.855178 (exact)
Prev. frac. ex. | .1785714 | -.8551782 .6369391 (exact)
Prev. frac. pop | .1010782 |
+-------------------------------------------------
chi2(1) = 0.27 Pr>chi2 = 0.6064
. cc Casos_Controles NCsputigena
Proportion
| Exposed Unexposed | Total Exposed
-----------------+------------------------+------------------------
Cases | 27 31 | 58 0.4655
Controls | 15 38 | 53 0.2830
-----------------+------------------------+------------------------
Total | 42 69 | 111 0.3784
| |
| Point estimate | [95% Conf. Interval]
|------------------------+------------------------
Odds ratio | 2.206452 | .93557 5.269853 (exact)
Attr. frac. ex. | .5467836 | -.0688671 .8102414 (exact)
Attr. frac. pop | .2545372 |
+-------------------------------------------------
chi2(1) = 3.92 Pr>chi2 = 0.0477
. cc Casos_Controles NEnodatum
Proportion
| Exposed Unexposed | Total Exposed
-----------------+------------------------+------------------------
Cases | 31 27 | 58 0.5345
Controls | 14 39 | 53 0.2642
-----------------+------------------------+------------------------
Total | 45 66 | 111 0.4054
| |
| Point estimate | [95% Conf. Interval]
|------------------------+------------------------
Odds ratio | 3.198413 | 1.342662 7.738544 (exact)
Attr. frac. ex. | .6873449 | .2552107 .8707767 (exact)
Attr. frac. pop | .367374 |
+-------------------------------------------------
chi2(1) = 8.40 Pr>chi2 = 0.0038
. cc Casos_Controles NFnucnuc
Proportion
| Exposed Unexposed | Total Exposed
-----------------+------------------------+------------------------
Cases | 43 15 | 58 0.7414
Controls | 22 31 | 53 0.4151
-----------------+------------------------+------------------------
Total | 65 46 | 111 0.5856
| |
| Point estimate | [95% Conf. Interval]
|------------------------+------------------------
Odds ratio | 4.039394 | 1.687321 9.786518 (exact)
Attr. frac. ex. | .7524381 | .4073446 .8978186 (exact)
Attr. frac. pop | .557842 |
+-------------------------------------------------
chi2(1) = 12.15 Pr>chi2 = 0.0005
. cc Casos_Controles NFperiodonticum
Proportion
| Exposed Unexposed | Total Exposed
-----------------+------------------------+------------------------
Cases | 47 11 | 58 0.8103
Controls | 28 25 | 53 0.5283
-----------------+------------------------+------------------------
Total | 75 36 | 111 0.6757
| |
| Point estimate | [95% Conf. Interval]
|------------------------+------------------------
Odds ratio | 3.814935 | 1.515646 9.880842 (exact)
Attr. frac. ex. | .7378723 | .3402153 .8987941 (exact)
Attr. frac. pop | .597931 |
+-------------------------------------------------
chi2(1) = 10.05 Pr>chi2 = 0.0015
. cc Casos_Controles NPintermedia
Proportion
| Exposed Unexposed | Total Exposed
-----------------+------------------------+------------------------
Cases | 50 8 | 58 0.8621
Controls | 33 20 | 53 0.6226
-----------------+------------------------+------------------------
Total | 83 28 | 111 0.7477
| |
| Point estimate | [95% Conf. Interval]
|------------------------+------------------------
Odds ratio | 3.787879 | 1.382229 11.04323 (exact)
Attr. frac. ex. | .736 | .2765308 .9094467 (exact)
Attr. frac. pop | .6344828 |
+-------------------------------------------------
chi2(1) = 8.42 Pr>chi2 = 0.0037
. cc Casos_Controles NPnigrescens
Proportion
| Exposed Unexposed | Total Exposed
-----------------+------------------------+------------------------
Cases | 49 9 | 58 0.8448
Controls | 35 18 | 53 0.6604
-----------------+------------------------+------------------------
Total | 84 27 | 111 0.7568
| |
| Point estimate | [95% Conf. Interval]
|------------------------+------------------------
Odds ratio | 2.8 | 1.038605 7.889948 (exact)
Attr. frac. ex. | .6428571 | .0371705 .8732565 (exact)
Attr. frac. pop | .5431034 |
+-------------------------------------------------
chi2(1) = 5.12 Pr>chi2 = 0.0237
. cc Casos_Controles NPacnes
Proportion
| Exposed Unexposed | Total Exposed
-----------------+------------------------+------------------------
Cases | 20 38 | 58 0.3448
Controls | 6 47 | 53 0.1132
-----------------+------------------------+------------------------
Total | 26 85 | 111 0.2342
| |
| Point estimate | [95% Conf. Interval]
|------------------------+------------------------
Odds ratio | 4.122807 | 1.398832 13.66851 (exact)
Attr. frac. ex. | .7574468 | .2851181 .9268391 (exact)
Attr. frac. pop | .2611886 |
+-------------------------------------------------
chi2(1) = 8.28 Pr>chi2 = 0.0040
. cc Casos_Controles NSanginosus
Proportion
| Exposed Unexposed | Total Exposed
-----------------+------------------------+------------------------
Cases | 43 15 | 58 0.7414
Controls | 24 29 | 53 0.4528
-----------------+------------------------+------------------------
Total | 67 44 | 111 0.6036
| |
| Point estimate | [95% Conf. Interval]
|------------------------+------------------------
Odds ratio | 3.463889 | 1.452853 8.355696 (exact)
Attr. frac. ex. | .7113071 | .3116989 .8803212 (exact)
Attr. frac. pop | .5273484 |
+-------------------------------------------------
chi2(1) = 9.64 Pr>chi2 = 0.0019
. cc Casos_Controles NSgordonii
Proportion
| Exposed Unexposed | Total Exposed
-----------------+------------------------+------------------------
Cases | 32 26 | 58 0.5517
Controls | 14 39 | 53 0.2642
-----------------+------------------------+------------------------
Total | 46 65 | 111 0.4144
| |
| Point estimate | [95% Conf. Interval]
|------------------------+------------------------
Odds ratio | 3.428571 | 1.437642 8.304166 (exact)
Attr. frac. ex. | .7083333 | .3044164 .8795785 (exact)
Attr. frac. pop | .3908046 |
+-------------------------------------------------
chi2(1) = 9.44 Pr>chi2 = 0.0021
. cc Casos y Controles NTforsythia
variable y not found
r(111);
. cc Casos_Controles NTforsythia
Proportion
| Exposed Unexposed | Total Exposed
-----------------+------------------------+------------------------
Cases | 47 11 | 58 0.8103
Controls | 19 34 | 53 0.3585
-----------------+------------------------+------------------------
Total | 66 45 | 111 0.5946
| |
| Point estimate | [95% Conf. Interval]
|------------------------+------------------------
Odds ratio | 7.645933 | 2.988315 20.05005 (exact)
Attr. frac. ex. | .8692115 | .6653633 .9501248 (exact)
Attr. frac. pop | .7043611 |
+-------------------------------------------------
chi2(1) = 23.46 Pr>chi2 = 0.0000
. cc Casos_Controles NTdenticola
Proportion
| Exposed Unexposed | Total Exposed
-----------------+------------------------+------------------------
Cases | 33 25 | 58 0.5690
Controls | 16 37 | 53 0.3019
-----------------+------------------------+------------------------
Total | 49 62 | 111 0.4414
| |
| Point estimate | [95% Conf. Interval]
|------------------------+------------------------
Odds ratio | 3.0525 | 1.302888 7.228712 (exact)
Attr. frac. ex. | .6723997 | .2324744 .8616628 (exact)
Attr. frac. pop | .3825722 |
+-------------------------------------------------
chi2(1) = 8.01 Pr>chi2 = 0.0046
. cc Casos_Controles NVparvula
Proportion
| Exposed Unexposed | Total Exposed
-----------------+------------------------+------------------------
Cases | 43 15 | 58 0.7414
Controls | 31 22 | 53 0.5849
-----------------+------------------------+------------------------
Total | 74 37 | 111 0.6667
| |
| Point estimate | [95% Conf. Interval]
|------------------------+------------------------
Odds ratio | 2.034409 | .8478694 4.926896 (exact)
Attr. frac. ex. | .5084567 | -.1794269 .7970324 (exact)
Attr. frac. pop | .3769592 |
+-------------------------------------------------
chi2(1) = 3.05 Pr>chi2 = 0.0807
. cc Casos_Controles Nivtotales
| Nivtotales | Proportion
| Exposed Unexposed | Total Exposed
-----------------+------------------------+------------------------
Cases | 58 0 | 58 1.0000
Controls | 53 0 | 53 1.0000
-----------------+------------------------+------------------------
Total | 111 0 | 111 1.0000
| |
| Point estimate | [95% Conf. Interval]
|------------------------+------------------------
Odds ratio | . | 0 . (Cornfield)
Attr. frac. ex. | . | . . (Cornfield)
Attr. frac. pop | . |
+-------------------------------------------------
chi2(1) = . Pr>chi2 = .
Note: Exact confidence levels not possible with zero count cells.
. cc Casos_Controles PAgeorgiae
Proportion
| Exposed Unexposed | Total Exposed
-----------------+------------------------+------------------------
Cases | 29 29 | 58 0.5000
Controls | 32 21 | 53 0.6038
-----------------+------------------------+------------------------
Total | 61 50 | 111 0.5495
| |
| Point estimate | [95% Conf. Interval]
|------------------------+------------------------
Odds ratio | .65625 | .2880749 1.489613 (exact)
Prev. frac. ex. | .34375 | -.4896128 .7119251 (exact)
Prev. frac. pop | .2075472 |
+-------------------------------------------------
chi2(1) = 1.20 Pr>chi2 = 0.2724
. cc Casos_Controles PAnaeslundii
Proportion
| Exposed Unexposed | Total Exposed
-----------------+------------------------+------------------------
Cases | 21 37 | 58 0.3621
Controls | 22 31 | 53 0.4151
-----------------+------------------------+------------------------
Total | 43 68 | 111 0.3874
| |
| Point estimate | [95% Conf. Interval]
|------------------------+------------------------
Odds ratio | .7997543 | .3468442 1.843288 (exact)
Prev. frac. ex. | .2002457 | -.8432882 .6531558 (exact)
Prev. frac. pop | .0831209 |
+-------------------------------------------------
chi2(1) = 0.33 Pr>chi2 = 0.5668
. cc Casos_Controles PAab
Proportion
| Exposed Unexposed | Total Exposed
-----------------+------------------------+------------------------
Cases | 13 45 | 58 0.2241
Controls | 3 50 | 53 0.0566
-----------------+------------------------+------------------------
Total | 16 95 | 111 0.1441
| |
| Point estimate | [95% Conf. Interval]
|------------------------+------------------------
Odds ratio | 4.814815 | 1.1988 27.66375 (exact)
Attr. frac. ex. | .7923077 | .1658326 .9638516 (exact)
Attr. frac. pop | .1775862 |
+-------------------------------------------------
chi2(1) = 6.30 Pr>chi2 = 0.0121
. cc Casos_Controles PCrectus
Proportion
| Exposed Unexposed | Total Exposed
-----------------+------------------------+------------------------
Cases | 34 24 | 58 0.5862
Controls | 28 25 | 53 0.5283
-----------------+------------------------+------------------------
Total | 62 49 | 111 0.5586
| |
| Point estimate | [95% Conf. Interval]
|------------------------+------------------------
Odds ratio | 1.264881 | .5582039 2.868552 (exact)
Attr. frac. ex. | .2094118 | -.7914601 .6513921 (exact)
Attr. frac. pop | .1227586 |
+-------------------------------------------------
chi2(1) = 0.38 Pr>chi2 = 0.5394
. cc Casos_Controles PCgingivalis
Proportion
| Exposed Unexposed | Total Exposed
-----------------+------------------------+------------------------
Cases | 30 28 | 58 0.5172
Controls | 30 23 | 53 0.5660
-----------------+------------------------+------------------------
Total | 60 51 | 111 0.5405
| |
| Point estimate | [95% Conf. Interval]
|------------------------+------------------------
Odds ratio | .8214286 | .3630609 1.855178 (exact)
Prev. frac. ex. | .1785714 | -.8551782 .6369391 (exact)
Prev. frac. pop | .1010782 |
+-------------------------------------------------
chi2(1) = 0.27 Pr>chi2 = 0.6064
. cc Casos_Controles PCsputigena
Proportion
| Exposed Unexposed | Total Exposed
-----------------+------------------------+------------------------
Cases | 27 31 | 58 0.4655
Controls | 15 38 | 53 0.2830
-----------------+------------------------+------------------------
Total | 42 69 | 111 0.3784
| |
| Point estimate | [95% Conf. Interval]
|------------------------+------------------------
Odds ratio | 2.206452 | .93557 5.269853 (exact)
Attr. frac. ex. | .5467836 | -.0688671 .8102414 (exact)
Attr. frac. pop | .2545372 |
+-------------------------------------------------
chi2(1) = 3.92 Pr>chi2 = 0.0477
. cc Casos_Controles PEnodatum
Proportion
| Exposed Unexposed | Total Exposed
-----------------+------------------------+------------------------
Cases | 31 27 | 58 0.5345
Controls | 14 39 | 53 0.2642
-----------------+------------------------+------------------------
Total | 45 66 | 111 0.4054
| |
| Point estimate | [95% Conf. Interval]
|------------------------+------------------------
Odds ratio | 3.198413 | 1.342662 7.738544 (exact)
Attr. frac. ex. | .6873449 | .2552107 .8707767 (exact)
Attr. frac. pop | .367374 |
+-------------------------------------------------
chi2(1) = 8.40 Pr>chi2 = 0.0038
. cc Casos_Controles PFnucnuc
Proportion
| Exposed Unexposed | Total Exposed
-----------------+------------------------+------------------------
Cases | 43 15 | 58 0.7414
Controls | 22 31 | 53 0.4151
-----------------+------------------------+------------------------
Total | 65 46 | 111 0.5856
| |
| Point estimate | [95% Conf. Interval]
|------------------------+------------------------
Odds ratio | 4.039394 | 1.687321 9.786518 (exact)
Attr. frac. ex. | .7524381 | .4073446 .8978186 (exact)
Attr. frac. pop | .557842 |
+-------------------------------------------------
chi2(1) = 12.15 Pr>chi2 = 0.0005
. cc Casos_Controles PFperiodonticum
Proportion
| Exposed Unexposed | Total Exposed
-----------------+------------------------+------------------------
Cases | 47 11 | 58 0.8103
Controls | 28 25 | 53 0.5283
-----------------+------------------------+------------------------
Total | 75 36 | 111 0.6757
| |
| Point estimate | [95% Conf. Interval]
|------------------------+------------------------
Odds ratio | 3.814935 | 1.515646 9.880842 (exact)
Attr. frac. ex. | .7378723 | .3402153 .8987941 (exact)
Attr. frac. pop | .597931 |
+-------------------------------------------------
chi2(1) = 10.05 Pr>chi2 = 0.0015
. cc Casos_Controles PPgingivalis
Proportion
| Exposed Unexposed | Total Exposed
-----------------+------------------------+------------------------
Cases | 51 7 | 58 0.8793
Controls | 24 29 | 53 0.4528
-----------------+------------------------+------------------------
Total | 75 36 | 111 0.6757
| |
| Point estimate | [95% Conf. Interval]
|------------------------+------------------------
Odds ratio | 8.803571 | 3.138406 26.74671 (exact)
Attr. frac. ex. | .8864097 | .6813669 .9626122 (exact)
Attr. frac. pop | .7794293 |
+-------------------------------------------------
chi2(1) = 22.99 Pr>chi2 = 0.0000
. cc Casos_Controles PPintermedia
Proportion
| Exposed Unexposed | Total Exposed
-----------------+------------------------+------------------------
Cases | 50 8 | 58 0.8621
Controls | 33 20 | 53 0.6226
-----------------+------------------------+------------------------
Total | 83 28 | 111 0.7477
| |
| Point estimate | [95% Conf. Interval]
|------------------------+------------------------
Odds ratio | 3.787879 | 1.382229 11.04323 (exact)
Attr. frac. ex. | .736 | .2765308 .9094467 (exact)
Attr. frac. pop | .6344828 |
+-------------------------------------------------
chi2(1) = 8.42 Pr>chi2 = 0.0037
. cc Casos_Controles PPnigrescens
Proportion
| Exposed Unexposed | Total Exposed
-----------------+------------------------+------------------------
Cases | 49 9 | 58 0.8448
Controls | 35 18 | 53 0.6604
-----------------+------------------------+------------------------
Total | 84 27 | 111 0.7568
| |
| Point estimate | [95% Conf. Interval]
|------------------------+------------------------
Odds ratio | 2.8 | 1.038605 7.889948 (exact)
Attr. frac. ex. | .6428571 | .0371705 .8732565 (exact)
Attr. frac. pop | .5431034 |
+-------------------------------------------------
chi2(1) = 5.12 Pr>chi2 = 0.0237
. cc Casos_Controles PPacnes
Proportion
| Exposed Unexposed | Total Exposed
-----------------+------------------------+------------------------
Cases | 20 38 | 58 0.3448
Controls | 6 47 | 53 0.1132
-----------------+------------------------+------------------------
Total | 26 85 | 111 0.2342
| |
| Point estimate | [95% Conf. Interval]
|------------------------+------------------------
Odds ratio | 4.122807 | 1.398832 13.66851 (exact)
Attr. frac. ex. | .7574468 | .2851181 .9268391 (exact)
Attr. frac. pop | .2611886 |
+-------------------------------------------------
chi2(1) = 8.28 Pr>chi2 = 0.0040
. cc Casos_Controles PSanginosus
Proportion
| Exposed Unexposed | Total Exposed
-----------------+------------------------+------------------------
Cases | 43 15 | 58 0.7414
Controls | 24 29 | 53 0.4528
-----------------+------------------------+------------------------
Total | 67 44 | 111 0.6036
| |
| Point estimate | [95% Conf. Interval]
|------------------------+------------------------
Odds ratio | 3.463889 | 1.452853 8.355696 (exact)
Attr. frac. ex. | .7113071 | .3116989 .8803212 (exact)
Attr. frac. pop | .5273484 |
+-------------------------------------------------
chi2(1) = 9.64 Pr>chi2 = 0.0019
. cc Casos_Controles PSgordonii
Proportion
| Exposed Unexposed | Total Exposed
-----------------+------------------------+------------------------
Cases | 32 26 | 58 0.5517
Controls | 14 39 | 53 0.2642
-----------------+------------------------+------------------------
Total | 46 65 | 111 0.4144
| |
| Point estimate | [95% Conf. Interval]
|------------------------+------------------------
Odds ratio | 3.428571 | 1.437642 8.304166 (exact)
Attr. frac. ex. | .7083333 | .3044164 .8795785 (exact)
Attr. frac. pop | .3908046 |
+-------------------------------------------------
chi2(1) = 9.44 Pr>chi2 = 0.0021
. cc Casos_Controles PTforsythia
Proportion
| Exposed Unexposed | Total Exposed
-----------------+------------------------+------------------------
Cases | 47 11 | 58 0.8103
Controls | 19 34 | 53 0.3585
-----------------+------------------------+------------------------
Total | 66 45 | 111 0.5946
| |
| Point estimate | [95% Conf. Interval]
|------------------------+------------------------
Odds ratio | 7.645933 | 2.988315 20.05005 (exact)
Attr. frac. ex. | .8692115 | .6653633 .9501248 (exact)
Attr. frac. pop | .7043611 |
+-------------------------------------------------
chi2(1) = 23.46 Pr>chi2 = 0.0000
. cc Casos_Controles PTdenticola
Proportion
| Exposed Unexposed | Total Exposed
-----------------+------------------------+------------------------
Cases | 33 25 | 58 0.5690
Controls | 16 37 | 53 0.3019
-----------------+------------------------+------------------------
Total | 49 62 | 111 0.4414
| |
| Point estimate | [95% Conf. Interval]
|------------------------+------------------------
Odds ratio | 3.0525 | 1.302888 7.228712 (exact)
Attr. frac. ex. | .6723997 | .2324744 .8616628 (exact)
Attr. frac. pop | .3825722 |
+-------------------------------------------------
chi2(1) = 8.01 Pr>chi2 = 0.0046
. cc Casos_Controles PVparvula
Proportion
| Exposed Unexposed | Total Exposed
-----------------+------------------------+------------------------
Cases | 43 15 | 58 0.7414
Controls | 31 22 | 53 0.5849
-----------------+------------------------+------------------------
Total | 74 37 | 111 0.6667
| |
| Point estimate | [95% Conf. Interval]
|------------------------+------------------------
Odds ratio | 2.034409 | .8478694 4.926896 (exact)
Attr. frac. ex. | .5084567 | -.1794269 .7970324 (exact)
Attr. frac. pop | .3769592 |
+-------------------------------------------------
chi2(1) = 3.05 Pr>chi2 = 0.0807
. cc Casos_Controles NPintermedia
Proportion
| Exposed Unexposed | Total Exposed
-----------------+------------------------+------------------------
Cases | 50 8 | 58 0.8621
Controls | 33 20 | 53 0.6226
-----------------+------------------------+------------------------
Total | 83 28 | 111 0.7477
| |
| Point estimate | [95% Conf. Interval]
|------------------------+------------------------
Odds ratio | 3.787879 | 1.382229 11.04323 (exact)
Attr. frac. ex. | .736 | .2765308 .9094467 (exact)
Attr. frac. pop | .6344828 |
+-------------------------------------------------
chi2(1) = 8.42 Pr>chi2 = 0.0037
. cc Casos_Controles EnodatumP
Proportion
| Exposed Unexposed | Total Exposed
-----------------+------------------------+------------------------
Cases | 31 27 | 58 0.5345
Controls | 14 39 | 53 0.2642
-----------------+------------------------+------------------------
Total | 45 66 | 111 0.4054
| |
| Point estimate | [95% Conf. Interval]
|------------------------+------------------------
Odds ratio | 3.198413 | 1.342662 7.738544 (exact)
Attr. frac. ex. | .6873449 | .2552107 .8707767 (exact)
Attr. frac. pop | .367374 |
+-------------------------------------------------
chi2(1) = 8.40 Pr>chi2 = 0.0038
. cc Casos_Controles FnucnucP
Proportion
| Exposed Unexposed | Total Exposed
-----------------+------------------------+------------------------
Cases | 43 15 | 58 0.7414
Controls | 22 31 | 53 0.4151
-----------------+------------------------+------------------------
Total | 65 46 | 111 0.5856
| |
| Point estimate | [95% Conf. Interval]
|------------------------+------------------------
Odds ratio | 4.039394 | 1.687321 9.786518 (exact)
Attr. frac. ex. | .7524381 | .4073446 .8978186 (exact)
Attr. frac. pop | .557842 |
+-------------------------------------------------
chi2(1) = 12.15 Pr>chi2 = 0.0005
. cc Casos Controles NFnucnuc
variable Controles not found
r(111);
. cc Casos_Controles NFnucnuc
Proportion
| Exposed Unexposed | Total Exposed
-----------------+------------------------+------------------------
Cases | 43 15 | 58 0.7414
Controls | 22 31 | 53 0.4151
-----------------+------------------------+------------------------
Total | 65 46 | 111 0.5856
| |
| Point estimate | [95% Conf. Interval]
|------------------------+------------------------
Odds ratio | 4.039394 | 1.687321 9.786518 (exact)
Attr. frac. ex. | .7524381 | .4073446 .8978186 (exact)
Attr. frac. pop | .557842 |
+-------------------------------------------------
chi2(1) = 12.15 Pr>chi2 = 0.0005
. tabulate PAgeorgiae Casos_Controles
| Casos_Controles
PAgeorgiae | Control Casos | Total
-----------+----------------------+----------
No | 21 29 | 50
si | 32 29 | 61
-----------+----------------------+----------
Total | 53 58 | 111
. cc Casos_Controles NPgingivalis
Proportion
| Exposed Unexposed | Total Exposed
-----------------+------------------------+------------------------
Cases | 51 7 | 58 0.8793
Controls | 24 29 | 53 0.4528
-----------------+------------------------+------------------------
Total | 75 36 | 111 0.6757
| |
| Point estimate | [95% Conf. Interval]
|------------------------+------------------------
Odds ratio | 8.803571 | 3.138406 26.74671 (exact)
Attr. frac. ex. | .8864097 | .6813669 .9626122 (exact)
Attr. frac. pop | .7794293 |
+-------------------------------------------------
chi2(1) = 22.99 Pr>chi2 = 0.0000
. cc Casos_Controles PPgingivalis
Proportion
| Exposed Unexposed | Total Exposed
-----------------+------------------------+------------------------
Cases | 51 7 | 58 0.8793
Controls | 24 29 | 53 0.4528
-----------------+------------------------+------------------------
Total | 75 36 | 111 0.6757
| |
| Point estimate | [95% Conf. Interval]
|------------------------+------------------------
Odds ratio | 8.803571 | 3.138406 26.74671 (exact)
Attr. frac. ex. | .8864097 | .6813669 .9626122 (exact)
Attr. frac. pop | .7794293 |
+-------------------------------------------------
chi2(1) = 22.99 Pr>chi2 = 0.0000
. cc Casos_Controles PgingivalisP
Proportion
| Exposed Unexposed | Total Exposed
-----------------+------------------------+------------------------
Cases | 51 7 | 58 0.8793
Controls | 24 29 | 53 0.4528
-----------------+------------------------+------------------------
Total | 75 36 | 111 0.6757
| |
| Point estimate | [95% Conf. Interval]
|------------------------+------------------------
Odds ratio | 8.803571 | 3.138406 26.74671 (exact)
Attr. frac. ex. | .8864097 | .6813669 .9626122 (exact)
Attr. frac. pop | .7794293 |
+-------------------------------------------------
chi2(1) = 22.99 Pr>chi2 = 0.0000
. tabulate PgingivalisP Casos_Controles
Pgingivali | Casos_Controles
sP | Control Casos | Total
-----------+----------------------+----------
0 | 29 7 | 36
.3 | 0 1 | 1
.56 | 0 1 | 1
.59 | 1 0 | 1
.62 | 0 1 | 1
.85 | 1 0 | 1
1.16 | 0 1 | 1
1.32 | 1 0 | 1
1.37 | 1 0 | 1
1.45 | 1 0 | 1
1.71 | 0 1 | 1
1.73 | 0 1 | 1
1.75 | 0 1 | 1
1.83 | 0 1 | 1
1.94 | 0 1 | 1
2.02 | 1 0 | 1
2.15 | 0 1 | 1
2.48 | 1 0 | 1
2.64 | 1 0 | 1
2.69 | 0 1 | 1
2.72 | 0 1 | 1
2.97 | 1 0 | 1
3.12 | 1 0 | 1
3.13 | 0 1 | 1
3.16 | 0 1 | 1
3.42 | 1 0 | 1
3.57 | 1 0 | 1
3.72 | 0 1 | 1
3.85 | 0 1 | 1
4.98 | 0 1 | 1
5.59 | 0 1 | 1
5.82 | 0 1 | 1
6.49 | 0 1 | 1
7.09 | 0 1 | 1
7.31 | 0 1 | 1
7.62 | 1 0 | 1
8.04 | 0 1 | 1
8.28 | 0 1 | 1
8.47 | 1 0 | 1
9.02 | 1 0 | 1
9.49 | 0 1 | 1
9.87 | 1 0 | 1
10.87 | 0 1 | 1
12.35 | 0 1 | 1
12.56 | 0 1 | 1
12.64 | 0 1 | 1
12.83 | 1 0 | 1
13.11 | 0 1 | 1
13.81 | 0 1 | 1
14.05 | 0 1 | 1
14.11 | 0 1 | 1
14.53 | 0 1 | 1
14.85 | 0 1 | 1
15.03 | 0 1 | 1
15.14 | 1 0 | 1
15.21 | 1 0 | 1
15.73 | 0 1 | 1
16.13 | 0 1 | 1
17.4 | 0 1 | 1
17.61 | 0 1 | 1
17.69 | 0 1 | 1
18.13 | 1 0 | 1
18.59 | 1 0 | 1
18.61 | 0 1 | 1
19.69 | 0 1 | 1
19.99 | 0 1 | 1
20.19 | 0 1 | 1
22.08 | 0 1 | 1
23.39 | 0 1 | 1
24.37 | 1 0 | 1
25.03 | 1 0 | 1
26.25 | 0 1 | 1
32.11 | 0 1 | 1
32.88 | 0 1 | 1
41.83 | 0 1 | 1
48.62 | 1 0 | 1
-----------+----------------------+----------
Total | 53 58 | 111
. tabulate PAab Casos_Controles
| Casos_Controles
PAab | Control Casos | Total
-----------+----------------------+----------
No | 50 45 | 95
si | 3 13 | 16
-----------+----------------------+----------
Total | 53 58 | 111
. generate var131 = 47 in 1
(110 missing values generated)
. swilk NPgingivalis NAgeorgiae
Shapiro-Wilk W test for normal data
Variable | Obs W V z Prob>z
-------------+------------------------------------------------------
NPgingivalis | 111 0.81110 17.021 6.324 0.00000
NAgeorgiae | 111 0.76343 21.316 6.826 0.00000
. swilk NPgingivalis NAgeorgiae NAnaeslundii NAab NCrectus NCgingivalis NCsputigena NEnodatum NFnucnuc NFperiodonticum NPintermed
> ia NPnigrescens NPacnes NSanginosus NSgordonii NTforsythia NTdenticola NVparvula Nivtotales
Shapiro-Wilk W test for normal data
Variable | Obs W V z Prob>z
-------------+------------------------------------------------------
NPgingivalis | 111 0.81110 17.021 6.324 0.00000
NAgeorgiae | 111 0.76343 21.316 6.826 0.00000
NAnaeslundii | 111 0.77452 20.317 6.719 0.00000
NAab | 111 0.66966 29.765 7.571 0.00000
NCrectus | 111 0.71210 25.942 7.264 0.00000
NCgingivalis | 111 0.57362 38.420 8.140 0.00000
NCsputigena | 111 0.59428 36.558 8.029 0.00000
NEnodatum | 111 0.69643 27.354 7.382 0.00000
NFnucnuc | 111 0.88606 10.267 5.196 0.00000
NFperiodon~m | 111 0.70971 26.157 7.282 0.00000
NPintermedia | 111 0.88556 10.311 5.206 0.00000
NPnigrescens | 111 0.86912 11.793 5.505 0.00000
NPacnes | 111 0.56785 38.940 8.170 0.00000
NSanginosus | 111 0.78021 19.805 6.662 0.00000
NSgordonii | 111 0.70747 26.359 7.299 0.00000
NTforsythia | 111 0.84435 14.025 5.892 0.00000
NTdenticola | 111 0.67923 28.904 7.505 0.00000
NVparvula | 111 0.32039 61.237 9.180 0.00000
Nivtotales | 111 0.41475 52.735 8.847 0.00000
. rename var131 Pol2570
. rename Pol2570 SNP2570
. generate str var132 = "a" in 1
(110 missing values generated)
. generate str var133 = "a" in 1
(110 missing values generated)
. rename var132 SNP896
. rename var133 SNP
. rename SNP SNP1196
. save "C:\Users\Raúl Castro C\Desktop\Base de datos\Base de Raúl_MCB2020.dta", replace
file C:\Users\Raúl Castro C\Desktop\Base de datos\Base de Raúl_MCB2020.dta saved
. tab NPgingivalis NAgeorgiae NAnaeslundii NAab NCrectus NCgingivalis NCsputigena NEnodatum NFnucnuc NFperiodonticum NPintermedia
> NPnigrescens NPacnes NSanginosus NSgordonii NTforsythia NTdenticola NVparvula Nivtotales
too many variables specified
r(103);
. tabulate NPgingivalis NAgeorgiae NAnaeslundii NAab NCrectus NCgingivalis NCsputigena NEnodatum NFnucnuc NFperiodonticum NPinter
> media NPnigrescens NPacnes NSanginosus NSgordonii NTforsythia NTdenticola NVparvula Nivtotales
too many variables specified
r(103);
. tabulate NPgingivalis NAgeorgiae NAnaeslundii NAab NCrectus NCgingivalis NCsputigena NEnodatum NFnucnuc NFperiodonticum NPinter
> media NPnigrescens NPacnes NSanginosus NSgordonii NTforsythia NTdenticola NVparvula
too many variables specified
r(103);
. tab NPgingivalis NAgeorgiae NAnaeslundii NAab NCrectus NCgingivalis NCsputigena NEnodatum NFnucnuc NFperiodonticum NPintermedia
> NPnigrescens NPacnes NSanginosus NSgordonii NTforsythia NTdenticola NVparvula
too many variables specified
r(103);
. tab NPnigrescens
NPnigrescen |
s | Freq. Percent Cum.
------------+-----------------------------------
0 | 27 24.32 24.32
.12 | 1 0.90 25.23
.15 | 1 0.90 26.13
.22 | 1 0.90 27.03
.23 | 1 0.90 27.93
.26 | 1 0.90 28.83
.36 | 1 0.90 29.73
.59 | 1 0.90 30.63
.7 | 1 0.90 31.53
.71 | 1 0.90 32.43
.72 | 2 1.80 34.23
.77 | 1 0.90 35.14
.86 | 2 1.80 36.94
.91 | 1 0.90 37.84
1.03 | 1 0.90 38.74
1.04 | 1 0.90 39.64
1.09 | 1 0.90 40.54
1.12 | 1 0.90 41.44
1.24 | 1 0.90 42.34
1.3 | 1 0.90 43.24
1.37 | 1 0.90 44.14
1.62 | 1 0.90 45.05
1.63 | 1 0.90 45.95
1.67 | 1 0.90 46.85
1.98 | 1 0.90 47.75
2.02 | 1 0.90 48.65
2.24 | 1 0.90 49.55
2.4 | 1 0.90 50.45
2.48 | 1 0.90 51.35
4.08 | 1 0.90 52.25
4.75 | 1 0.90 53.15
5.11 | 1 0.90 54.05
5.12 | 1 0.90 54.95
5.34 | 1 0.90 55.86
5.43 | 1 0.90 56.76
5.49 | 1 0.90 57.66
5.96 | 1 0.90 58.56
6.02 | 1 0.90 59.46
6.06 | 1 0.90 60.36
6.46 | 2 1.80 62.16
6.64 | 1 0.90 63.06
6.65 | 1 0.90 63.96
7.38 | 1 0.90 64.86
8 | 1 0.90 65.77
8.36 | 1 0.90 66.67
8.52 | 1 0.90 67.57
8.58 | 1 0.90 68.47
8.6 | 1 0.90 69.37
9.07 | 1 0.90 70.27
9.1 | 1 0.90 71.17
9.36 | 1 0.90 72.07
9.4 | 1 0.90 72.97
9.94 | 1 0.90 73.87
10.31 | 1 0.90 74.77
10.38 | 1 0.90 75.68
10.44 | 1 0.90 76.58
10.59 | 1 0.90 77.48
10.71 | 1 0.90 78.38
11.12 | 1 0.90 79.28
11.35 | 1 0.90 80.18
11.71 | 1 0.90 81.08
11.88 | 1 0.90 81.98
11.97 | 1 0.90 82.88
12.11 | 1 0.90 83.78
12.37 | 1 0.90 84.68
12.45 | 1 0.90 85.59
12.81 | 1 0.90 86.49
13.45 | 1 0.90 87.39
13.72 | 1 0.90 88.29
13.78 | 1 0.90 89.19
14.7 | 1 0.90 90.09
14.94 | 1 0.90 90.99
15.13 | 1 0.90 91.89
15.82 | 1 0.90 92.79
15.91 | 1 0.90 93.69
15.95 | 1 0.90 94.59
16.01 | 1 0.90 95.50
17.02 | 1 0.90 96.40
17.21 | 2 1.80 98.20
17.22 | 1 0.90 99.10
17.5 | 1 0.90 100.00
------------+-----------------------------------
Total | 111 100.00
. xtile Casos_Controles BOP
variable Casos_Controles already defined
r(110);
. tabstat edad , statistics( p50 p5 p95 ) by( Casos_Controles BOP ) columns(variables)
by(): too many variables specified
r(103);
. tabstat edad , statistics( p50 p5 p95 ) by( BOP Casos_Controles ) columns(variables)
by(): too many variables specified
r(103);
. tab BOP
BOP | Freq. Percent Cum.
------------+-----------------------------------
0 | 47 42.34 42.34
4 | 11 9.91 52.25
7 | 9 8.11 60.36
8 | 2 1.80 62.16
9 | 1 0.90 63.06
11 | 3 2.70 65.77
14 | 8 7.21 72.97
15 | 3 2.70 75.68
16 | 1 0.90 76.58
17 | 3 2.70 79.28
18 | 4 3.60 82.88
21 | 2 1.80 84.68
25 | 2 1.80 86.49
28 | 2 1.80 88.29
29 | 1 0.90 89.19
32 | 1 0.90 90.09
33 | 1 0.90 90.99
36 | 1 0.90 91.89
39 | 3 2.70 94.59
43 | 1 0.90 95.50
44 | 1 0.90 96.40
56 | 1 0.90 97.30
64 | 2 1.80 99.10
69 | 1 0.90 100.00
------------+-----------------------------------
Total | 111 100.00
. tabstat BOP, statistics( median p25 p75 ) by(Casos_Controles)
Summary for variables: BOP
by categories of: Casos_Controles
Casos_Controles | p50 p25 p75
----------------+------------------------------
Control | 0 0 4
Casos | 14 7 28
----------------+------------------------------
Total | 4 0 15
-----------------------------------------------
. ranksum BOP, by(Casos_Controles)
Two-sample Wilcoxon rank-sum (Mann-Whitney) test
Casos_Cont~s | obs rank sum expected
-------------+---------------------------------
Control | 53 1875.5 2968
Casos | 58 4340.5 3248
-------------+---------------------------------
combined | 111 6216 6216
unadjusted variance 28690.67
adjustment for ties -2234.50
----------
adjusted variance 26456.16
Ho: BOP(Casos_~s==Control) = BOP(Casos_~s==Casos)
z = -6.717
Prob > |z| = 0.0000
. tabstat movilidadprom , statistics( median p25 p
> 75 ) by(Casos_Controles)
Summary for variables: movilidadprom
by categories of: Casos_Controles
Casos_Controles | p50 p25 p75
----------------+------------------------------
Control | 0 0 0
Casos | 1 0 1
----------------+------------------------------
Total | 0 0 1
-----------------------------------------------
. tabstat profbolsprom , statistics( median p25 p7
> 5 ) by(Casos_Controles)
Summary for variables: profbolsprom
by categories of: Casos_Controles
Casos_Controles | p50 p25 p75
----------------+------------------------------
Control | 0 0 0
Casos | 4 4 4.28
----------------+------------------------------
Total | 4 0 4
-----------------------------------------------
. ranksum profbolsprom , by(Casos_Controles)
Two-sample Wilcoxon rank-sum (Mann-Whitney) test
Casos_Cont~s | obs rank sum expected
-------------+---------------------------------
Control | 53 1770.5 2968
Casos | 58 4445.5 3248
-------------+---------------------------------
combined | 111 6216 6216
unadjusted variance 28690.67
adjustment for ties -3661.48
----------
adjusted variance 25029.18
Ho: profbo~m(Casos_~s==Control) = profbo~m(Casos_~
> s==Casos)
z = -7.569
Prob > |z| = 0.0000
. tabstat PTIpromed , statistics( median p25 p75 )
> by(Casos_Controles)
Summary for variables: PTIpromed
by categories of: Casos_Controles
Casos_Controles | p50 p25 p75
----------------+------------------------------
Control | 0 0 3
Casos | 4.255 4 4.62
----------------+------------------------------
Total | 4 0 4.27
-----------------------------------------------
.
.
. ranksum PTIpromed , by(Casos_Controles)
Two-sample Wilcoxon rank-sum (Mann-Whitney) test
Casos_Cont~s | obs rank sum expected
-------------+---------------------------------
Control | 53 1564.5 2968
Casos | 58 4651.5 3248
-------------+---------------------------------
combined | 111 6216 6216
unadjusted variance 28690.67
adjustment for ties -1775.80
----------
adjusted variance 26914.87
Ho: PTIpro~d(Casos_~s==Control) = PTIpro~d(Casos_~
> s==Casos)
z = -8.555
Prob > |z| = 0.0000
.
.
.
.
.
Analisis para las graficas de frecuencias bacterianas
tab dx
tab dx PAgeorgiae
tab dx PAgeorgiae , col chi
tab PAgeorgiae Casos_Controles , col chi
tab Casos_Controles PAgeorgiae , col chi
tab Casos_Controles PAgeorgiae , col chi
tab Casos_Controles PAnaeslundii , col chi
tab Casos_Controles PAab , col chi
tab Casos_Controles PCrectus , col chi
tab Casos_Controles PCgingivalis , col chi
tab Casos_Controles PCsputigena , col chi
tab Casos_Controles PEnodatum , col chi
tab Casos_Controles PFnucnuc , col chi
tab Casos_Controles PFperiodonticum , col chi
tab Casos_Controles PFperiodonticum , col chi
tab Casos_Controles PPgingivalis , col chi
tab Casos_Controles PCgingivalis , col chi
tab Casos_Controles PPgingivalis , col chi
tab Casos_Controles PPintermedia , col chi
tab Casos_Controles PPintermedia , col chi PPnigrescens
tab Casos_Controles PPnigrescens , col chi
tab Casos_Controles PPacnes , col chi
tab Casos_Controles PSanginosus , col chi
tab Casos_Controles PSgordonii , col chi
tab Casos_Controles PTforsythia , col chi
tab Casos_Controles PTdenticola , col chi
tab Casos_Controles PVparvula , col chi
tab dx PVparvula , col chi
tab dx PAgeorgiae , col chi
tab dx PAnaeslundii , col chi
tab dx PAab , col chi
tab dx PCrectus , col chi
tab dx PCgingivalis , col chi
tab dx PCsputigena , col chi
tab dx PEnodatum , col chi
tab dx PFnucnuc , col chi
tab dx PFperiodonticum , col chi
tab dx PPgingivalis , col chi
tab dx PPintermedia , col chi
tab dx PPnigrescens , col chi
tab dx PPacnes , col chi
tab dx PSanginosus , col chi
tab dx PSgordonii , col chi
tab dx PTforsythia , col chi
tab dx PTdenticola , col chi
Para Tabla 3. Frecuencias genotÃpicas y alélicas de los polimorfismos A-2570, A896G y C1196T del gen TLR4 en jóvenes con y sin periodontitis.
cc Casos_Controles SNP2570
tab Alelos_AG_GG_896 Casos_Controles
cci 3 1 50 57, exact
tabulate Casos_Controles SNP2570, cell chi2
tabulate Casos_Controles SNP2570, cell chi2 exact
tab Casos_Controles Alelos_AG_GG_896
cci 3 50 1 57, exact
tab Casos_Controles Alelo_2570_
cci 24 29 37 21, chi
tab Casos_Controles Alelo_1196
cci 3 50 1 57, exact
tab SNP_896
tab SNP_1196
Tablas de los polimorfismos con ayuda del dr Marco leyva
logistic Casos_Controles i.SNP2570 escolaridad edad fuma
tab BOP
sum PTIpromed
glm PTIpromed i.SNP2570, family(gaussian) link(identity)
glm PTIpromed i.SNP2570 escolaridad edad fuma, family(gaussian) link(identity)
*Haplotipos
logistic Casos_Controles i.SNP2570 escolaridad edad
glm PTIpromed i.SNP2570 escolaridad edad fuma, family(gaussian) link(identity)
tab Casos_Controles SNP2570
genhwcci 29 23 1 21 36 1
tab Casos_Controles SNP_896
genhwcci 50 3 0 57 1 0
genhwcci 50 3 0 57 1 0
tab Casos_Controles SNP_1196
genhwcci 50 3 0 57 1 0
logistic Casos_Controles i.SNP2570
logistic Casos_Controles i.SNP2570
logistic Casos_Controles i.SNP_896
logistic Casos_Controles i.SNP_1196
logistic Casos_Controles i.SNP2570 sexo escolaridad edad
logistic Casos_Controles i.SNP2570 sexo escolaridad
logistic Casos_Controles i.SNP2570 escolaridad edad
logistic Casos_Controles i.SNP2570 sexo edad
logistic Casos_Controles i.SNP2570 sexo escolaridad edad
logistic Casos_Controles i.SNP2570 sexo escolaridad edad
logistic Casos_Controles i.SNP_896 sexo escolaridad edad
logistic Casos_Controles i.SNP_1196 sexo escolaridad edad
glm BOP i.SNP2570, family(gaussian) link(identity)
glm profbolsprom i.SNP2570, family(gaussian) link(identity)
glm PTIpromed i.SNP2570, family(gaussian) link(identity)
glm PTIpromed i.SNP2570 edad sexo escolaridad , family(gaussian) link(identity)
glm PTIpromed i.SNP2570, family(gaussian) link(identity)
glm BOP i.SNP2570, family(gaussian) link(identity)
glm BOP i.SNP2570 edad sexo escolaridad , family(gaussian) link(identity)
glm profbolsprom i.SNP2570, family(gaussian) link(identity)
glm profbolsprom i.SNP2570 edad sexo escolaridad , family(gaussian) link(identity)
glm BOP SNP_896 , family(gaussian) link(identity)
glm BOP SNP_896 edad sexo escolaridad , family(gaussian) link(identity)
glm BOP i.SNP_896 , family(gaussian) link(identity)
glm profbolsprom i.SNP_896 , family(gaussian) link(identity)
glm profbolsprom i.SNP_896 edad sexo escolaridad , family(gaussian) link(identity)
glm PTIpromed i.SNP_896 , family(gaussian) link(identity)
glm PTIpromed i.SNP_896 edad sexo escolaridad , family(gaussian) link(identity)
glm BOP i.SNP_1196 , family(gaussian) link(identity)
glm BOP i.SNP_1196 edad sexo escolaridad , family(gaussian) link(identity)
glm profbolsprom i.SNP_1196 , family(gaussian) link(identity)
glm profbolsprom i.SNP_1196 edad sexo escolaridad , family(gaussian) link(identity)
glm PTIpromed i.SNP_1196 , family(gaussian) link(identity)
glm PTIpromed i.SNP_1196 edad sexo escolaridad , family(gaussian) link(identity)
*
*se inicia con la correlación entre los snp y las bacterias (solo variables cualitativa)
tab SNP2570 PAgeorgiae
cc SNP2570 PAgeorgiae
tab SNP2570 PAgeorgiae
swilk PAgeorgiae PAnaeslundii PAab PCrectus PCgingivalis PCsputigena PEnodatum PFnucnuc PFperiodonticum PPgingivalis PPintermedia PPnigrescens PPacnes PSanginosus PSgordonii PTforsythia PTdenticola PVparvula SNP2570 SNP_896 SNP_1196
tabulate PAgeorgiae SNP2570, cell chi2 exact
logistic PAgeorgiae i.SNP2570
logistic PAnaeslundii i.SNP2570
logistic PAab i.SNP2570
logistic PAgeorgiae i.SNP2570
logistic PAnaeslundii i.SNP2570
logistic PAab i.SNP2570
logistic PCrectus i.SNP2570
logistic PCgingivalis i.SNP2570
logistic PCsputigena i.SNP2570
logistic PEnodatum i.SNP2570
logistic PFnucnuc i.SNP2570
logistic PFperiodonticum i.SNP2570
logistic PPgingivalis i.SNP2570
logistic PPintermedia i.SNP2570
logistic PPnigrescens i.SNP2570
logistic PPacnes i.SNP2570
logistic PSanginosus i.SNP2570
logistic PSgordonii i.SNP2570
logistic PTforsythia i.SNP2570
logistic PTdenticola i.SNP2570
logistic PVparvula i.SNP2570
logistic PAgeorgiae i.SNP_896
logistic PAnaeslundii i.SNP_896
logistic PAab i.SNP_896
logistic PCrectus i.SNP_896
logistic PCgingivalis i.SNP_896
logistic PCsputigena i.SNP_896
logistic PEnodatum i.SNP_896
logistic PFnucnuc i.SNP_896
logistic PFperiodonticum i.SNP_896
logistic PPintermedia i.SNP_896
logistic PPnigrescens i.SNP_896
logistic PPacnes i.SNP_896
logistic PSanginosus i.SNP_896
logistic PSgordonii i.SNP_896
logistic PTforsythia i.SNP_896
logistic PTdenticola i.SNP_896
logistic PVparvula i.SNP_896
logistic PAgeorgiae i.SNP_1196
logistic PAnaeslundii i.SNP_1196
logistic PAab i.SNP_1196
logistic PCrectus i.SNP_1196
logistic PCgingivalis i.SNP_1196
logistic PCsputigena i.SNP_1196
logistic PEnodatum i.SNP_1196
logistic PFnucnuc i.SNP_1196
logistic PFperiodonticum i.SNP_1196
logistic PPgingivalis i.SNP_1196
logistic PPintermedia i.SNP_1196
logistic PPnigrescens i.SNP_1196
logistic PPacnes i.SNP_1196
logistic PSanginosus i.SNP_1196
logistic PSgordonii i.SNP_1196
logistic PTforsythia i.SNP_1196
logistic PTdenticola i.SNP_1196
logistic PVparvula i.SNP_1196
use "C:\Users\Raúl Castro C\Desktop\Tesis final\Base de datos\Raul Castro_MCB_2021_mayo.dta"
logistic PAgeorgiae i.SNP2570
logistic PAgeorgiae i.Alelo_1196
logistic PAgeorgiae i.Alelo_1196
logistic PAnaeslundii i.Alelo_1196
logistic PAab i.Alelo_1196
logistic PCrectus i.Alelo_1196
logistic PCgingivalis i.Alelo_1196
logistic PCsputigena i.Alelo_1196
logistic PEnodatum i.Alelo_1196
logistic PFnucnuc i.Alelo_1196
logistic PFperiodonticum i.Alelo_1196
logistic PPgingivalis i.Alelo_1196
logistic PPintermedia i.Alelo_1196
logistic PPnigrescens i.Alelo_1196
logistic PPacnes i.Alelo_1196
logistic PSanginosus i.Alelo_1196
logistic PSgordonii i.Alelo_1196
logistic PTforsythia i.Alelo_1196
logistic PTdenticola i.Alelo_1196
logistic PVparvula i.Alelo_1196
logistic PVparvula i.Alelo_1196
logistic PAgeorgiae i.Alelos_AG_GG_896
logistic PAnaeslundii i.Alelos_AG_GG_896
logistic PAab i.Alelos_AG_GG_896
logistic PCrectus i.Alelos_AG_GG_896
logistic PCgingivalis i.Alelos_AG_GG_896
logistic PCsputigena i.Alelos_AG_GG_896
logistic PEnodatum i.Alelos_AG_GG_896
logistic PFnucnuc i.Alelos_AG_GG_896
logistic PFperiodonticum i.Alelos_AG_GG_896
logistic PPgingivalis i.Alelos_AG_GG_896
logistic PPintermedia i.Alelos_AG_GG_896
logistic PPnigrescens i.Alelos_AG_GG_896
logistic PPacnes i.Alelos_AG_GG_896
logistic PSanginosus i.Alelos_AG_GG_896
logistic PSgordonii i.Alelos_AG_GG_896
logistic PTforsythia i.Alelos_AG_GG_896
logistic PTdenticola i.Alelos_AG_GG_896
logistic PVparvula i.Alelos_AG_GG_896
logistic PAgeorgiae i.Alelo_2570_
logistic PAgeorgiae i.Alelo_2570_
logistic PAnaeslundii i.Alelo_2570_
logistic PAab i.Alelo_2570_
logistic PCrectus i.Alelo_2570_
logistic PCgingivalis i.Alelo_2570_
logistic PCsputigena i.Alelo_2570_
logistic PEnodatum i.Alelo_2570_
logistic PFnucnuc i.Alelo_2570_
logistic PFperiodonticum i.Alelo_2570_
logistic PPgingivalis i.Alelo_2570_
logistic PPintermedia i.Alelo_2570_
logistic PPnigrescens i.Alelo_2570_
logistic PPacnes i.Alelo_2570_
logistic PSanginosus i.Alelo_2570_
logistic PSgordonii i.Alelo_2570_
logistic PTforsythia i.Alelo_2570_
logistic PTdenticola i.Alelo_2570_
logistic PVparvula i.Alelo_2570_
Analisis tablas de riesgo cuantitativo, y graficas de frecuencia bacteriana cuantitativa
mlogit dx PTforsythia edad sexo escolaridad , baseoutcome(0) rrr
logistic Casos_Controles i.SNP2570 sexo
logistic Casos_Controles i.SNP_896 sexo
logistic Casos_Controles i.SNP_896 sexo SNP_1196
logistic Casos_Controles i.SNP_1196 sexo
logistic Casos_Controles i.SNP_1196
logistic Casos_Controles i.SNP_896
swilk
swilk indiceriesgo
logistic Casos_Controles NPgingivalis sexo
tab NPgingivalis
logistic Casos_Controles NPgingivalis sexo
logistic Casos_Controles NPgingivalis
logistic Casos_Controles NAgeorgiae
logistic Casos_Controles NAnaeslundii
logistic Casos_Controles NAab
logistic Casos_Controles NCrectus
logistic Casos_Controles NCgingivalis
logistic Casos_Controles NCrectus NCsputigena
logistic Casos_Controles NCsputigena
logistic Casos_Controles NEnodatum
logistic Casos_Controles NFnucnuc
logistic Casos_Controles NFperiodonticum
logistic Casos_Controles NPintermedia
logistic Casos_Controles NPnigrescens
logistic Casos_Controles NPacnes
logistic Casos_Controles NSanginosus
logistic Casos_Controles NSgordonii
logistic Casos_Controles NTforsythia
logistic Casos_Controles NTdenticola
logistic Casos_Controles NVparvula
kwallis Casos_Controles, by(NPgingivalis)
swilk NPgingivalis
mean NAgeorgiae NPgingivalis NAnaeslundii NAab NCrectus
mean NPgingivalis NAgeorgiae NAnaeslundii NAab NCrectus NCgingivalis NCsputigena NEnodatum NFnucnuc NFperiodonticum NPintermedia NPnigrescens NPacnes NSanginosus NSgordonii NTforsythia NTdenticola NVparvula
mean NPgingivalis NAgeorgiae NAnaeslundii NAab NCrectus NCgingivalis NCsputigena NEnodatum NFnucnuc NFperiodonticum NPintermedia NPnigrescens NPacnes NSanginosus NSgordonii NTforsythia NTdenticola NVparvula, by (Casos_Controles)
mean NAgeorgiae NPgingivalis NAnaeslundii NAab NCrectus, over(Casos_Controles)
mean NPgingivalis NAgeorgiae NAnaeslundii NAab NCrectus NCgingivalis NCsputigena NEnodatum NFnucnuc NFperiodonticum NPintermedia NPnigrescens NPacnes NSanginosus NSgordonii NTforsythia NTdenticola NVparvula, over(Casos_Controles)
kwallis Casos_Controles, by( NPgingivalis )
kwallis Casos_Controles, by( NAgeorgiae )
kwallis Casos_Controles, by( NAnaeslundii )
swilk NPgingivalis NAgeorgiae NAnaeslundii NAab NCrectus NCgingivalis NCsputigena NEnodatum NFnucnuc NFperiodonticum NPintermedia NPnigrescens NPacnes NSanginosus NSgordonii NTforsythia NTdenticola NVparvula
swilk NPgingivalis NAgeorgiae NAnaeslundii NAab NCrectus NCgingivalis NCsputigena NEnodatum NFnucnuc NFperiodonticum NPintermedia NPnigrescens NPacnes NSanginosus NSgordonii NTforsythia NTdenticola NVparvula
by Casos_Controles, sort : spearman NAgeorgiae
Analisis de la placa dental
glm Placa_Prom i.SNP2570 , family(gaussian) link(identity)
glm Placa_Prom i.SNP2570 sexo edad escolaridad , family(gaussian) link(identity)
glm Placa_Prom i.SNP_896 , family(gaussian) link(identity)
glm Placa_Prom i.SNP_896 sexo edad escolaridad , family(gaussian) link(identity)
glm Placa_Prom i.SNP_1196 , family(gaussian) link(identity)
glm Placa_Prom i.SNP_1196 sexo edad escolaridad , family(gaussian) link(identity)
swilk Placa_Prom
tabstat Placa_Prom, statistics( p50 p25 p75 ) by(Casos_Controles)
ranksum Placa_Prom , by(Casos_Controles)
Analisis del habito tabaquico
se recategorizó y el valor de p fue calculado por chi2
tab recat_fuma Casos_Controles
tab fuma Casos_Controles
swilk recat_fuma
save "C:\Users\Raúl Castro C\Desktop\Base de datos\Raul Castro_MCB_2021_mayo.dta", replace
tabulate recat_fuma, subpop(Casos_Controles)
tabulate recat_fuma Casos_Controles
tabulate recat_fuma Casos_Controles, col chi
* Vamos a realizar el analisis del artÃculo para el tercer congreso internacional de biociencias 2021
*vamos aplicar KW para cualitativa de cigarrillos por dÃa y cuantitatiba de las 18
especies bacterianas
*** Agregamos los genotipos faltantes a la tabla 6 y la tabla 7 de la tesis final
use "C:\Users\Raúl Castro C\Desktop\Tesis final\Base de datos\Raul Castro_MCB_2021_mayo.dta"
glm profbolsprom i.SNP2570, family(gaussian) link(identity)
glm profbolsprom i.SNP2570, family(gaussian) link(identity)
glm profbolsprom i.Alelo_2570_ , family(gaussian) link(identity)
glm BOP i.Alelo_2570_ , family(gaussian) link(identity)
glm BOP i.Alelo_2570_ edad sexo escolaridad , family(gaussian) link(identity)
glm BOP i.SNP2570 edad sexo escolaridad , family(gaussian) link(identity)
glm BOP i.Alelo_2570_ edad sexo escolaridad , family(gaussian) link(identity)
glm BOP i.Alelo_1196 edad sexo escolaridad , family(gaussian) link(identity)
glm BOP i.Alelo_1196 , family(gaussian) link(identity)
glm BOP i.Alelos_AG_GG_896 edad sexo escolaridad , family(gaussian) link(identity)
glm BOP i.Alelos_AG_GG_896 , family(gaussian) link(identity)
glm profbolsprom i.SNP2570, family(gaussian) link(identity)
glm profbolsprom i.Alelo_2570_ , family(gaussian) link(identity)
glm profbolsprom i.Alelos_AG_GG_896 , family(gaussian) link(identity)
glm profbolsprom i.Alelo_1196 , family(gaussian) link(identity)
glm profbolsprom i.Alelo_2570_ edad sexo escolaridad , family(gaussian) link(identity)
glm profbolsprom i.Alelos_AG_GG_896 edad sexo escolaridad , family(gaussian) link(identity)
glm profbolsprom i.Alelo_1196 edad sexo escolaridad , family(gaussian) link(identity)
glm PTIpromed i.SNP_896 , family(gaussian) link(identity)
glm PTIpromed i.Alelo_2570_ , family(gaussian) link(identity)
glm PTIpromed i.Alelos_AG_GG_896 , family(gaussian) link(identity)
glm PTIpromed i.Alelo_1196 , family(gaussian) link(identity)
glm PTIpromed i.Alelo_2570_ edad sexo escolaridad , family(gaussian) link(identity)
glm PTIpromed i.Alelos_AG_GG_896 edad sexo escolaridad , family(gaussian) link(identity)
glm PTIpromed i.Alelo_1196 edad sexo escolaridad , family(gaussian) link(identity)
glm indiceriesgo i.SNP_896 edad sexo escolaridad , family(gaussian) link(identity)
glm Placa_Prom i.SNP_896 edad sexo escolaridad , family(gaussian) link(identity)
glm Placa_Prom i.Alelo_2570_ edad sexo escolaridad , family(gaussian) link(identity)
glm Placa_Prom i.Alelos_AG_GG_896 , family(gaussian) link(identity)
glm Placa_Prom i.Alelo_1196 , family(gaussian) link(identity)
glm Placa_Prom i.Alelo_2570_ , family(gaussian) link(identity)
glm Placa_Prom i.Alelos_AG_GG_896 edad sexo escolaridad , family(gaussian) link(identity)
glm Placa_Prom i.Alelo_1196 edad sexo escolaridad , family(gaussian) link(identity)